copa

Functions to perform cancer outlier profile analysis.

COPA is a method to find genes that undergo recurrent fusion in a given cancer type by finding pairs of genes that have mutually exclusive outlier profiles.

Author	James W. MacDonald
Maintainer	James W. MacDonald

Vignettes (Documentation)

Package Downloads

copa.pdf

Source	copa_1.0.1.tar.gz
Windows binary	copa_1.0.1.zip
OS X binary	copa_1.0.1.tgz

Details

biocViews	OneChannel , TwoChannel , DifferentialExpression , Visualization
Depends	Biobase
Suggests	colonCA
Imports
SystemRequirements
License	LLGPL
URL
dependsOnMe
suggestsMe