xmapcore

Core access to the xmap database (installed separately)

Bioconductor version: Development (2.8)

xmapcore allows mapping between genetic features and any available Affymetrix Exon arrays for Homo Sapiens, Mus Musculus, Rattus Norvegicus and Schizosaccharomyces Pombe.

Author: Tim Yates

Maintainer: Tim Yates

To install this package, start R and enter:

source("http:///biocLite.R")
biocLite("xmapcore")    

Documentation

PDF cookbook.pdf
PDF SplicingIndexExample.pdf
PDF R Script xmapcore installation instruction
PDF R Script xmapcore primer

Reference Manual

Details

biocViews Annotation, Bioinformatics, Microarray, OneChannel, ReportWriting, Transcription, Visualization
Depends R, methods, IRanges
Imports DBI, RMySQL, digest, Biobase
Suggests RUnit
System Requirements
License GPL-2
URL http://xmap.picr.man.ac.uk, http://www.bioconductor.org
Depends On Me rnaSeqMap
Imports Me
Suggests Me
Version 1.5.4

Package Downloads

Package Source xmapcore_1.5.4.tar.gz
Windows Binary
MacOS 10.5 (Leopard) binary xmapcore_1.5.4.tgz
Package Downloads Report Download Stats

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