nnNorm

Spatial and intensity based normalization of cDNA microarray data based on robust neural nets

Bioconductor version: Development (2.8)

This package allows to detect and correct for spatial and intensity biases with two-channel microarray data. The normalization method implemented in this package is based on robust neural networks fitting.

Author: Adi Laurentiu Tarca

Maintainer: Adi Laurentiu Tarca

To install this package, start R and enter:

source("http:///biocLite.R")
biocLite("nnNorm")    

Documentation

PDF	R Script	nnNorm Tutorial
PDF		nnNormGuide.pdf

Reference Manual

Details

biocViews	Microarray, TwoChannel, Preprocessing
Depends	R, marray
Imports	graphics, grDevices, marray, methods, nnet, stats
Suggests
System Requirements
License	LGPL
URL	http://bioinformaticsprb.med.wayne.edu/tarca/
Depends On Me
Imports Me
Suggests Me
Version	2.15.0

Package Downloads

Package Source	nnNorm_2.15.0.tar.gz
Windows Binary	nnNorm_2.15.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary	nnNorm_2.15.0.tgz
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