farms

FARMS - Factor Analysis for Robust Microarray Summarization

Bioconductor version: Development (2.8)

The package provides the summarization algorithm called Factor Analysis for Robust Microarray Summarization (FARMS) and a novel unsupervised feature selection criterion called "I/NI-calls"

Author: Djork-Arne Clevert

Maintainer: Djork-Arne Clevert

To install this package, start R and enter:

source("http:///biocLite.R")
biocLite("farms")    

Documentation

PDF R Script Using farms

Reference Manual

Details

biocViews GeneExpression, Microarray, Preprocessing, QualityControl
Depends R, affy, MASS, methods
Imports affy, MASS, Biobase, methods, graphics
Suggests affydata, Biobase, utils
System Requirements
License LGPL (>= 2.1)
URL http://www.bioinf.jku.at/software/farms/farms.html
Depends On Me
Imports Me
Suggests Me
Version 1.3.0

Package Downloads

Package Source farms_1.3.0.tar.gz
Windows Binary farms_1.3.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary farms_1.3.0.tgz
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