affypdnn

Probe Dependent Nearest Neighbours (PDNN) for the affy package

Bioconductor version: Development (2.8)

The package contains functions to perform the PDNN method described by Li Zhang et al.

Author: H. Bjorn Nielsen and Laurent Gautier (Many thanks to Li Zhang early communications about the existence of the PDNN program and related publications).

Maintainer: Laurent Gautier

To install this package, start R and enter:

source("http:///biocLite.R")
biocLite("affypdnn")    

Documentation

PDF R Script affypdnn

Reference Manual

Details

biocViews OneChannel, Microarray, Preprocessing
Depends R, affy
Imports
Suggests affydata, hgu95av2probe
System Requirements
License LGPL
URL
Depends On Me
Imports Me
Suggests Me
Version 1.25.0

Package Downloads

Package Source affypdnn_1.25.0.tar.gz
Windows Binary affypdnn_1.25.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary affypdnn_1.25.0.tgz
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