XDE

XDE: a Bayesian hierarchical model for cross-study analysis of differential gene expression

Bioconductor version: Development (2.8)

Multi-level model for cross-study detection of differential gene expression.

Author: R.B. Scharpf, G. Parmigiani, A.B. Nobel, and H. Tjelmeland

Maintainer: Robert Scharpf

To install this package, start R and enter:

source("http:///biocLite.R")
biocLite("XDE")    

Documentation

PDF R Script XDE Vignette
PDF xdeLIN.pdf
PDF R Script XdeParameterClass Vignette

Reference Manual

Details

biocViews Microarray, Bioinformatics, DifferentialExpression
Depends R, Biobase, methods, graphics
Imports Biobase, genefilter, graphics, grDevices, gtools, MergeMaid, methods, stats, utils
Suggests siggenes, genefilter, MASS, RColorBrewer, GeneMeta
System Requirements
License LGPL-2
URL
Depends On Me
Imports Me
Suggests Me
Version 1.11.0

Package Downloads

Package Source XDE_1.11.0.tar.gz
Windows Binary XDE_1.11.0.zip (32-bit only)
MacOS 10.5 (Leopard) binary XDE_1.11.0.tgz
Package Downloads Report Download Stats

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