OTUbase

Provides structure and functions for the analysis of OTU data

Bioconductor version: Development (2.8)

Provides a platform for Operational Taxonomic Unit based analysis

Author: Daniel Beck, Matt Settles, and James A. Foster

Maintainer: Daniel Beck

To install this package, start R and enter:

source("http:///biocLite.R")
biocLite("OTUbase")    

Documentation

PDF

R Script

An introduction to OTUbase

Reference Manual

Details

biocViews	Bioinformatics, HighThroughputSequencingData, DataImport
Depends	R, methods, ShortRead, Biobase, vegan
Imports	Biostrings, ShortRead, IRanges
Suggests
System Requirements
License	Artistic-2.0
URL
Depends On Me	mcaGUI
Imports Me
Suggests Me
Version	1.1.1

Package Downloads

Package Source	OTUbase_1.1.1.tar.gz
Windows Binary	OTUbase_1.1.1.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary	OTUbase_1.1.1.tgz
Package Downloads Report	Download Stats