ExiMiR

R functions for the normalization of Exiqon miRNA array data

Bioconductor version: Development (2.8)

This package contains functions for reading raw data in ImaGene TXT format obtained from Exiqon miRCURY LNA arrays, annotating them with appropriate GAL files, and normalizing them using a spike-in probe-based method.

Author: Sylvain Gubian, Alain Sewer , PMP SA

Maintainer: Sylvain Gubian

To install this package, start R and enter:

source("http:///biocLite.R")
biocLite("ExiMiR")    

Documentation

PDF

R Script

Description of ExiMiR

Reference Manual

Details

biocViews	Microarray, OneChannel, DualChannel, Preprocessing, GeneExpression, Transcription
Depends	R, Biobase, affy
Imports	affyio, Biobase, preprocessCore
Suggests
System Requirements
License	GPL-2
URL
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Version	0.99.0

Package Downloads

Package Source	ExiMiR_0.99.0.tar.gz
Windows Binary	ExiMiR_0.99.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary	ExiMiR_0.99.0.tgz
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