prada

Data analysis for cell-based functional assays

Bioconductor version: Release (2.7)

Tools for analysing and navigating data from high-throughput phenotyping experiments based on cellular assays and fluorescent detection (flow cytometry (FACS), high-content screening microscopy).

Author: Florian Hahne, Wolfgang Huber , Markus Ruschhaupt, Joern Toedling

Maintainer: Florian Hahne

To install this package, start R and enter:

source("http:///biocLite.R")
biocLite("prada")    

Documentation

PDF R Script Combining prada output and cellHTS
PDF R Script Removal of contaminants from FACS data

Reference Manual

Details

biocViews CellBasedAssays, Visualization
Depends R, Biobase, RColorBrewer, grid, methods, rrcov
Imports Biobase, graphics, grDevices, grid, MASS, methods, RColorBrewer, rrcov, utils
Suggests cellHTS, rflowcyt, tcltk
System Requirements
License LGPL
URL http://www.dkfz.de/mga/whuber, http://www.dkfz.de/LIFEdb
Depends On Me RNAither, cellHTS, domainsignatures, rflowcyt
Imports Me cellHTS2, rflowcyt
Suggests Me
Version 1.26.0

Package Downloads

Package Source prada_1.26.0.tar.gz
Windows Binary prada_1.26.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary prada_1.26.0.tgz
Package Downloads Report Download Stats

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Fred Hutchinson Cancer Research Center