ontoCAT

Ontology parsing

Bioconductor version: Release (2.7)

The ontoCAT package provides a simple interface to ontology described in OWL or OBO format. Package can load the ontology from a local file or on the fly from a URL. Number of functions allow to parse an ontology, search terms in it, find out term parents and children.

Author: Misha Kapushevsky, Pavel Kurnosov, Natalja Kurbatova

Maintainer: Natalja Kurbatova

To install this package, start R and enter:

source("http:///biocLite.R")
biocLite("ontoCAT")    

Documentation

PDF R Script ontoCAT package

Reference Manual

Details

biocViews Classification, DataRepresentation
Depends rJava, methods
Imports
Suggests
System Requirements
License Apache License
URL
Depends On Me
Imports Me
Suggests Me
Version 1.0.0

Package Downloads

Package Source ontoCAT_1.0.0.tar.gz
Windows Binary ontoCAT_1.0.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary
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