farms

FARMS - Factor Analysis for Robust Microarray Summarization

Bioconductor version: Release (2.7)

The package provides the summarization algorithm called Factor Analysis for Robust Microarray Summarization (FARMS) and a novel unsupervised feature selection criterion called "I/NI-calls"

Author: Djork-Arne Clevert

Maintainer: Djork-Arne Clevert

To install this package, start R and enter:

source("http:///biocLite.R")
biocLite("farms")    

Documentation

PDF

R Script

Using farms

Reference Manual

Details

biocViews	GeneExpression, Microarray, Preprocessing, QualityControl
Depends	R, affy, MASS, methods
Imports	affy, MASS, Biobase, methods, graphics
Suggests	affydata, Biobase, utils
System Requirements
License	LGPL (>= 2.1)
URL	http://www.bioinf.jku.at/software/farms/farms.html
Depends On Me
Imports Me
Suggests Me
Version	1.2.0

Package Downloads

Package Source	farms_1.2.0.tar.gz
Windows Binary	farms_1.2.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary	farms_1.2.0.tgz
Package Downloads Report	Download Stats