beadarraySNP

Normalization and reporting of Illumina SNP bead arrays

Bioconductor version: Release (2.7)

Importing data from Illumina SNP experiments and performing copy number calculations and reports.

Author: Jan Oosting

Maintainer: Jan Oosting

To install this package, start R and enter:

source("http:///biocLite.R")
biocLite("beadarraySNP")    

Documentation

PDF

R Script

beadarraySNP.pdf

Reference Manual

Details

biocViews	CopyNumberVariants, SNP, GeneticVariability, TwoChannel, Preprocessing, DataImport
Depends	methods, Biobase, quantsmooth
Imports
Suggests	aCGH, affy, limma, snapCGH, beadarray, DNAcopy
System Requirements
License	GPL-2
URL
Depends On Me
Imports Me
Suggests Me
Version	1.16.0

Package Downloads

Package Source	beadarraySNP_1.16.0.tar.gz
Windows Binary	beadarraySNP_1.16.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary	beadarraySNP_1.16.0.tgz
Package Downloads Report	Download Stats