CALIB

Calibration model for estimating absolute expression levels from microarray data

Bioconductor version: Release (2.7)

This package contains functions for normalizing spotted microarray data, based on a physically motivated calibration model. The model parameters and error distributions are estimated from external control spikes.

Author: Hui Zhao, Kristof Engelen, Bart De Moor and Kathleen Marchal

Maintainer: Hui Zhao

To install this package, start R and enter:

source("http:///biocLite.R")
biocLite("CALIB")    

Documentation

PDF R Script CALIB Overview
PDF readme.pdf

Reference Manual

Details

biocViews Microarray, TwoChannel, Preprocessing
Depends R, limma, methods
Imports limma, methods, graphics, stats, utils
Suggests
System Requirements
License LGPL
URL
Depends On Me
Imports Me
Suggests Me
Version 1.16.0

Package Downloads

Package Source CALIB_1.16.0.tar.gz
Windows Binary CALIB_1.16.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary CALIB_1.16.0.tgz
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Fred Hutchinson Cancer Research Center