BioSeqClass

Classification for Biological Sequences

Bioconductor version: Release (2.7)

Extracting Features from Biological Sequences and Building Classification Model

Author: Li Hong sysptm@gmail.com

Maintainer: Li Hong

To install this package, start R and enter:

source("http:///biocLite.R")
biocLite("BioSeqClass")    

Documentation

PDF cvFFSClassify0005.pdf
PDF FeatureSets16.pdf
PDF R Script Using the BioSeqClass Package
PDF workflow.pdf

Reference Manual

Details

biocViews Classification
Depends
Imports Biostrings, ipred, e1071, klaR, randomForest, class, tree, nnet, rpart, party, foreign, Biobase, utils, stats, grDevices
Suggests
System Requirements
License LGPL (>= 2.0)
URL
Depends On Me
Imports Me
Suggests Me
Version 1.8.0

Package Downloads

Package Source BioSeqClass_1.8.0.tar.gz
Windows Binary BioSeqClass_1.8.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary BioSeqClass_1.8.0.tgz
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Fred Hutchinson Cancer Research Center