Bioconductor version: 2.5
Methods for segmenting, normalising and processing aCGH data; including plotting functions for visualising raw and segmented data for individual and multiple arrays.
Author: Mike L. Smith, John C. Marioni, Steven McKinney, Thomas Hardcastle, Natalie P. Thorne
Maintainer: John Marioni
To install this package, start R and enter:
source("http:///biocLite.R") biocLite("snapCGH")
R Script | Segmentation Overview |
biocViews | Microarray, CopyNumberVariants, TwoChannel, Preprocessing |
Depends | limma, tilingArray, DNAcopy, GLAD, cluster, methods, aCGH |
Imports | |
Suggests | |
System Requirements | |
License | GPL |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | beadarraySNP |
Version | 1.16.0 |
Package Source | snapCGH_1.16.0.tar.gz |
Windows Binary | snapCGH_1.16.0.zip (32- & 64-bit) |
MacOS 10.5 (Leopard) binary | snapCGH_1.16.0.tgz |
Package Downloads Report | Download Stats |
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