nnNorm

Spatial and intensity based normalization of cDNA microarray data based on robust neural nets

Bioconductor version: 2.5

This package allows to detect and correct for spatial and intensity biases with two-channel microarray data. The normalization method implemented in this package is based on robust neural networks fitting.

Author: Adi Laurentiu Tarca

Maintainer: Adi Laurentiu Tarca

To install this package, start R and enter:

source("http:///biocLite.R")
biocLite("nnNorm")    

Documentation

PDF	R Script	nnNorm Tutorial
PDF		nnNormGuide.pdf

Reference Manual

Details

biocViews	Microarray, TwoChannel, Preprocessing
Depends	R, nnet, marray
Imports
Suggests
System Requirements
License	LGPL
URL	http://bioinformaticsprb.med.wayne.edu/tarca/
Depends On Me
Imports Me
Suggests Me
Version	2.10.0

Package Downloads

Package Source	nnNorm_2.10.0.tar.gz
Windows Binary	nnNorm_2.10.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary	nnNorm_2.10.0.tgz
Package Downloads Report	Download Stats