fdrame

FDR adjustments of Microarray Experiments (FDR-AME)

Bioconductor version: 2.5

This package contains two main functions. The first is fdr.ma which takes normalized expression data array, experimental design and computes adjusted p-values It returns the fdr adjusted p-values and plots, according to the methods described in (Reiner, Yekutieli and Benjamini 2002). The second, is fdr.gui() which creates a simple graphic user interface to access fdr.ma

Author: Yoav Benjamini, Effi Kenigsberg, Anat Reiner, Daniel Yekutieli

Maintainer: Effi Kenigsberg

To install this package, start R and enter:

source("http:///biocLite.R")
biocLite("fdrame")    

Documentation

PDF

R Script

Annotation Overview

Reference Manual

Details

biocViews	Microarray, DifferentialExpression, MultipleComparisons
Depends	tcltk
Imports
Suggests
System Requirements
License	GPL (>= 2)
URL
Depends On Me
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Version	1.18.0

Package Downloads

Package Source	fdrame_1.18.0.tar.gz
Windows Binary	fdrame_1.18.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary	fdrame_1.18.0.tgz
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