domainsignatures

Geneset enrichment based on InterPro domain signatures

Bioconductor version: 2.5

Find significantly enriched gene classifications in a list of functionally undescribed genes based on their InterPro domain structure.

Author: Florian Hahne, Tim Beissbarth

Maintainer: Florian Hahne

To install this package, start R and enter:

source("http:///biocLite.R")
biocLite("domainsignatures")    

Documentation

PDF

R Script

Gene set enrichment using InterPro domain signatures

Reference Manual

Details

biocViews	Bioinformatics, Annotation, Pathways
Depends	R, KEGG.db, prada, biomaRt, methods
Imports	AnnotationDbi
Suggests
System Requirements
License	Artistic-2.0
URL
Depends On Me
Imports Me
Suggests Me
Version	1.6.1

Package Downloads

Package Source	domainsignatures_1.6.1.tar.gz
Windows Binary	domainsignatures_1.6.1.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary	domainsignatures_1.6.1.tgz
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