Bioconductor version: 2.5
Using R enviroments for annotation.
Author: R. Gentleman
Maintainer: Biocore Team c/o BioC user list
To install this package, start R and enter:
source("http:///biocLite.R") biocLite("annotate")
R Script | Annotation Overview | |
R Script | Basic GO Usage | |
R Script | HowTo: Get HTML Output | |
R Script | HowTo: use chromosomal information | |
R Script | HOWTO: Use the online query tools | |
R Script | Using Affymetrix Probe Level Data | |
R Script | Using Data Packages | |
R Script | Using the homology package |
biocViews | Annotation, Pathways, GO, Affymetrix |
Depends | R, AnnotationDbi |
Imports | Biobase, AnnotationDbi, xtable, graphics, utils, stats, methods |
Suggests | Biobase, hgu95av2.db, genefilter, Biostrings, rae230a.db, rae230aprobe, tkWidgets, XML, GO.db, org.Hs.eg.db, org.Mm.eg.db, hom.Hs.inp.db |
System Requirements | |
License | Artistic-2.0 |
URL | |
Depends On Me | Agi4x44PreProcess, ChromHeatMap, GeneAnswers, geneplotter, GSEABase, idiogram, lumi, macat, MLInterfaces, ontoTools, PCpheno, RpsiXML, safe, ScISI |
Imports Me | affycoretools, Category, ChromHeatMap, codelink, genefilter, geneplotter, GlobalAncova, globaltest, GOstats, GSEABase, safe, ScISI, splicegear |
Suggests Me | BiocCaseStudies, biomaRt, geneplotter, globaltest, GOstats, GSEAlm, maigesPack, oneChannelGUI, puma, qpgraph, siggenes |
Version | 1.24.1 |
Package Source | annotate_1.24.1.tar.gz |
Windows Binary | annotate_1.24.1.zip (32- & 64-bit) |
MacOS 10.5 (Leopard) binary | annotate_1.24.1.tgz |
Package Downloads Report | Download Stats |
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