affyQCReport

QC Report Generation for affyBatch objects

Bioconductor version: 2.5

This package creates a QC report for an AffyBatch object. The report is intended to allow the user to quickly assess the quality of a set of arrays in an AffyBatch object.

Author: Craig Parman, Conrad Halling , Robert Gentleman

Maintainer: Craig Parman

To install this package, start R and enter:

source("http:///biocLite.R")
biocLite("affyQCReport")    

Documentation

PDF

R Script

affyQCReport: Methods for Generating Affymetrix QC Reports

Reference Manual

Details

biocViews	Microarray, OneChannel, QualityControl
Depends	Biobase, affy, simpleaffy, xtable, affyPLM, RColorBrewer, genefilter, lattice
Imports
Suggests	tkWidgets, affydata
System Requirements
License	LGPL (>= 2)
URL
Depends On Me
Imports Me
Suggests Me	BiocCaseStudies
Version	1.24.0

Package Downloads

Package Source	affyQCReport_1.24.0.tar.gz
Windows Binary	affyQCReport_1.24.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary	affyQCReport_1.24.0.tgz
Package Downloads Report	Download Stats