Bioconductor version: 2.5
Infrastructure shared by all the Biostrings-based genome data packages
Author: Herve Pages
Maintainer: H. Pages
To install this package, start R and enter:
source("http:///biocLite.R") biocLite("BSgenome")
R Script | Efficient genome searching with Biostrings and the BSgenome data packages | |
R Script | How to forge a BSgenome data package |
biocViews | Genetics, Infrastructure |
Depends | R, methods, IRanges, Biostrings |
Imports | |
Suggests | BSgenome.Celegans.UCSC.ce2, BSgenome.Hsapiens.UCSC.hg18, SNPlocs.Hsapiens.dbSNP.20071016, hgu95av2probe, Biobase |
System Requirements | |
License | Artistic-2.0 |
URL | |
Depends On Me | ChIPpeakAnno, chipseq, ShortRead |
Imports Me | ChIPpeakAnno, chipseq, ChIPseqR, GenomicFeatures, rtracklayer, ShortRead |
Suggests Me | Biostrings, GeneRegionScan |
Version | 1.14.2 |
Package Source | BSgenome_1.14.2.tar.gz |
Windows Binary | BSgenome_1.14.2.zip (32- & 64-bit) |
MacOS 10.5 (Leopard) binary | BSgenome_1.14.2.tgz |
Package Downloads Report | Download Stats |
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