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###
### Running command:
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###   F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD INSTALL zlibbioc
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* installing to library 'F:/biocbuild/bbs-3.20-bioc/R/library'
* installing *source* package 'zlibbioc' ...
** using staged installation

   **********************************************
   WARNING: this package has a configure script
         It probably needs manual configuration
   **********************************************


** libs
using C compiler: 'gcc.exe (GCC) 13.3.0'
mkdir -p "F:/biocbuild/bbs-3.20-bioc/R/library/00LOCK-zlibbioc/00new/zlibbioc/include" "F:/biocbuild/bbs-3.20-bioc/R/library/00LOCK-zlibbioc/00new/zlibbioc/libs/x64"
make -C zlib-1.2.5 -f"F:/biocbuild/bbs-3.20-bioc/R/etc/x64/Makeconf" -fwin32/Makefile.gcc libzbioc.a zlib1bioc.dll
make[1]: Entering directory '/f/biocbuild/bbs-3.20-bioc/meat/zlibbioc/src/zlib-1.2.5'
win32/Makefile.gcc:96: warning: overriding recipe for target '.c.o'
F:/biocbuild/bbs-3.20-bioc/R/etc/x64/Makeconf:289: warning: ignoring old recipe for target '.c.o'
gcc -m64  -O3 -Wall -DNO_VIZ -DZ_PREFIX -c -o adler32.o adler32.c
gcc -m64  -O3 -Wall -DNO_VIZ -DZ_PREFIX -c -o compress.o compress.c
gcc -m64  -O3 -Wall -DNO_VIZ -DZ_PREFIX -c -o crc32.o crc32.c
gcc -m64  -O3 -Wall -DNO_VIZ -DZ_PREFIX -c -o deflate.o deflate.c
gcc -m64  -O3 -Wall -DNO_VIZ -DZ_PREFIX -c -o gzclose.o gzclose.c
gcc -m64  -O3 -Wall -DNO_VIZ -DZ_PREFIX -c -o gzlib.o gzlib.c
gcc -m64  -O3 -Wall -DNO_VIZ -DZ_PREFIX -c -o gzread.o gzread.c
gcc -m64  -O3 -Wall -DNO_VIZ -DZ_PREFIX -c -o gzwrite.o gzwrite.c
gcc -m64  -O3 -Wall -DNO_VIZ -DZ_PREFIX -c -o infback.o infback.c
gcc -m64  -O3 -Wall -DNO_VIZ -DZ_PREFIX -c -o inffast.o inffast.c
gcc -m64  -O3 -Wall -DNO_VIZ -DZ_PREFIX -c -o inflate.o inflate.c
gcc -m64  -O3 -Wall -DNO_VIZ -DZ_PREFIX -c -o inftrees.o inftrees.c
gcc -m64  -O3 -Wall -DNO_VIZ -DZ_PREFIX -c -o trees.o trees.c
gcc -m64  -O3 -Wall -DNO_VIZ -DZ_PREFIX -c -o uncompr.o uncompr.c
gcc -m64  -O3 -Wall -DNO_VIZ -DZ_PREFIX -c -o zutil.o zutil.c
ar rcs libzbioc.a adler32.o compress.o crc32.o deflate.o gzclose.o gzlib.o gzread.o gzwrite.o infback.o inffast.o inflate.o inftrees.o trees.o uncompr.o zutil.o 
windres --define GCC_WINDRES --target=pe-x86-64 -o zlibrc.o win32/zlib1.rc
gcc -m64 -shared -Wl,--out-implib,libzbiocdll.a  \
-o zlib1bioc.dll win32/zlib.def adler32.o compress.o crc32.o deflate.o gzclose.o gzlib.o gzread.o gzwrite.o infback.o inffast.o inflate.o inftrees.o trees.o uncompr.o zutil.o  zlibrc.o
strip zlib1bioc.dll
make[1]: Leaving directory '/f/biocbuild/bbs-3.20-bioc/meat/zlibbioc/src/zlib-1.2.5'
cp zlib-1.2.5/libzbioc.a zlib-1.2.5/zlib1bioc.dll \
            "F:/biocbuild/bbs-3.20-bioc/R/library/00LOCK-zlibbioc/00new/zlibbioc/libs/x64"
cp zlib-1.2.5/zconf.h zlib-1.2.5/zlib.h "F:/biocbuild/bbs-3.20-bioc/R/library/00LOCK-zlibbioc/00new/zlibbioc/include"
gcc  -I"F:/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG     -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c R_init_zlibbioc.c -o R_init_zlibbioc.o
gcc -shared -s -static-libgcc -o zlibbioc.dll tmp.def R_init_zlibbioc.o -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.20-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.20-bioc/R/library/00LOCK-zlibbioc/00new/zlibbioc/libs/x64
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning in fun(libname, pkgname) :
  Package 'zlibbioc' is deprecated and will be removed from Bioconductor
  version 3.22
** testing if installed package can be loaded from final location
Warning in fun(libname, pkgname) :
  Package 'zlibbioc' is deprecated and will be removed from Bioconductor
  version 3.22
** testing if installed package keeps a record of temporary installation path
* DONE (zlibbioc)