############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data tidysbml ### ############################################################################## ############################################################################## * checking for file ‘tidysbml/DESCRIPTION’ ... OK * preparing ‘tidysbml’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘tidysbml-introduction.Rmd’ using rmarkdown Quitting from tidysbml-introduction.Rmd:190-198 [biomaRt] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `.chooseEnsemblMirror()`: ! Unable to query any Ensembl site --- Backtrace: ▆ 1. └─biomaRt::useEnsembl(biomart = "ensembl", dataset = "hsapiens_gene_ensembl") 2. └─biomaRt:::.chooseEnsemblMirror(mirror = mirror, http_config = http_config) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'tidysbml-introduction.Rmd' failed with diagnostics: Unable to query any Ensembl site --- failed re-building ‘tidysbml-introduction.Rmd’ SUMMARY: processing the following file failed: ‘tidysbml-introduction.Rmd’ Error: Vignette re-building failed. Execution halted