############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data scTensor ### ############################################################################## ############################################################################## * checking for file ‘scTensor/DESCRIPTION’ ... OK * preparing ‘scTensor’: * checking DESCRIPTION meta-information ... OK * installing the package to process help pages * saving partial Rd database * creating vignettes ... ERROR --- re-building ‘scTensor.Rmd’ using rmarkdown Quitting from scTensor.Rmd:75-77 [AHub2] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error in `.Hub_get1()`: ! no records found for the given index --- Backtrace: ▆ 1. ├─query(ah, c("LRBaseDb", "Homo sapiens", "v002"))[[1]] 2. └─query(ah, c("LRBaseDb", "Homo sapiens", "v002"))[[1]] 3. └─AnnotationHub (local) .local(x, i, j = j, ...) 4. └─AnnotationHub:::.Hub_get1(x[i], force = force, verbose = verbose) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'scTensor.Rmd' failed with diagnostics: no records found for the given index --- failed re-building ‘scTensor.Rmd’ --- re-building ‘scTensor_1_Data_format_ID_Conversion.Rmd’ using rmarkdown --- finished re-building ‘scTensor_1_Data_format_ID_Conversion.Rmd’ --- re-building ‘scTensor_2_Report_Interpretation.Rmd’ using rmarkdown --- finished re-building ‘scTensor_2_Report_Interpretation.Rmd’ --- re-building ‘scTensor_3_CCI_Simulation.Rmd’ using rmarkdown --- finished re-building ‘scTensor_3_CCI_Simulation.Rmd’ --- re-building ‘scTensor_4_Reanalysis.Rmd’ using rmarkdown --- finished re-building ‘scTensor_4_Reanalysis.Rmd’ SUMMARY: processing the following file failed: ‘scTensor.Rmd’ Error: Vignette re-building failed. Execution halted