##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD INSTALL rhdf5client
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.20-bioc/R/site-library’
* installing *source* package ‘rhdf5client’ ...
** using staged installation
** libs
using C compiler: ‘gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’
gcc -I"/home/biocbuild/bbs-3.20-bioc/R/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2  -Wall -c extract.c -o extract.o
extract.c: In function ‘extractBin’:
extract.c:101:52: warning: ‘rip’ may be used uninitialized [-Wmaybe-uninitialized]
  101 |     A[ia] = (Rf_isReal(resvec_sexp) ? rdp[ib] : rip[ib]);
      |                                                    ^
extract.c:89:8: note: ‘rip’ was declared here
   89 |   int *rip;
      |        ^~~
extract.c:101:42: warning: ‘rdp’ may be used uninitialized [-Wmaybe-uninitialized]
  101 |     A[ia] = (Rf_isReal(resvec_sexp) ? rdp[ib] : rip[ib]);
      |                                          ^
extract.c:90:11: note: ‘rdp’ was declared here
   90 |   double *rdp;
      |           ^~~
gcc -shared -L/home/biocbuild/bbs-3.20-bioc/R/lib -L/usr/local/lib -o rhdf5client.so extract.o -L/home/biocbuild/bbs-3.20-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.20-bioc/R/site-library/00LOCK-rhdf5client/00new/rhdf5client/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rhdf5client)