##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data mitch
###
##############################################################################
##############################################################################


* checking for file ‘mitch/DESCRIPTION’ ... OK
* preparing ‘mitch’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘infiniumMethArrayWorkflow.Rmd’ using rmarkdown
2024-11-19 17:47:14.310 R[9612:455107410] XType: com.apple.fonts is not accessible.
2024-11-19 17:47:14.311 R[9612:455107410] XType: XTFontStaticRegistry is enabled.
--- finished re-building ‘infiniumMethArrayWorkflow.Rmd’

--- re-building ‘mitchWorkflow.Rmd’ using rmarkdown
trying URL 'https://reactome.org/download/current/ReactomePathways.gmt.zip'
Content type 'application/zip' length 276644 bytes (270 KB)
==================================================
downloaded 270 KB


Quitting from lines 207-208 [plots] (mitchWorkflow.Rmd)
Error: processing vignette 'mitchWorkflow.Rmd' failed with diagnostics:
non-numeric argument to binary operator
--- failed re-building ‘mitchWorkflow.Rmd’

SUMMARY: processing the following file failed:
  ‘mitchWorkflow.Rmd’

Error: Vignette re-building failed.
Execution halted