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### Running command:
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###   /home/biocbuild/R/R/bin/R CMD check --install=check:miaSim.install-out.txt --library=/home/biocbuild/R/R/site-library --no-vignettes --timings miaSim_1.14.1.tar.gz
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* using log directory ‘/home/biocbuild/bbs-3.21-bioc/meat/miaSim.Rcheck’
* using R Under development (unstable) (2025-02-19 r87757)
* using platform: aarch64-unknown-linux-gnu
* R was compiled by
    aarch64-unknown-linux-gnu-gcc (GCC) 14.2.0
    GNU Fortran (GCC) 14.2.0
* running under: openEuler 24.03 (LTS-SP1)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘miaSim/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘miaSim’ version ‘1.14.1’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘miaSim’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... ERROR
Running examples in ‘miaSim-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: simulateHubbellRates
> ### Title: Hubbell's neutral model simulation applied to time series
> ### Aliases: simulateHubbellRates simulateHubbellRates-numeric
> ###   simulateHubbellRates,numeric-method
> 
> ### ** Examples
> 
> set.seed(42)
> tse <- simulateHubbellRates(n_species = 5)
> 
> miaViz::plotSeries(tse, assay.type = "counts", 
+     time.col = "time", colour.by  = "rownames")
Error in .local(object, ...) : argument "x" is missing, with no default
Calls: <Anonymous> -> <Anonymous> -> .local -> .is_a_string
Execution halted
Examples with CPU (user + system) or elapsed time > 5s
                          user system elapsed
simulateConsumerResource 8.172  0.212   8.403
simulateGLV              5.125  0.080   5.219
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 1 ERROR
See
  ‘/home/biocbuild/bbs-3.21-bioc/meat/miaSim.Rcheck/00check.log’
for details.