############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data chromstaR ### ############################################################################## ############################################################################## * checking for file ‘chromstaR/DESCRIPTION’ ... OK * preparing ‘chromstaR’: * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘chromstaR.Rnw’ using knitr 2024-11-08 16:28:20.787 R[76375:1446351] XType: Using static font registry. 2024-11-08 16:28:20.816 R[76376:1446349] XType: Using static font registry. 2024-11-08 16:28:20.825 R[76377:1446350] XType: Using static font registry. 2024-11-08 16:28:34.247 R[76919:1447600] XType: Using static font registry. 2024-11-08 16:28:34.253 R[76918:1447599] XType: Using static font registry. 2024-11-08 16:28:34.436 R[76920:1447601] XType: Using static font registry. 2024-11-08 16:28:34.578 R[76921:1447602] XType: Using static font registry. Quitting from lines 377-396 [multivariate_combinatorial_enrichment] (chromstaR.Rnw) Error: processing vignette 'chromstaR.Rnw' failed with diagnostics: The given dataset: rnorvegicus_gene_ensembl , is not valid. Correct dataset names can be obtained with the listDatasets() function. --- failed re-building ‘chromstaR.Rnw’ SUMMARY: processing the following file failed: ‘chromstaR.Rnw’ Error: Vignette re-building failed. Execution halted