############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data ReactomeGSA ### ############################################################################## ############################################################################## * checking for file ‘ReactomeGSA/DESCRIPTION’ ... OK * preparing ‘ReactomeGSA’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘analysing-scRNAseq.Rmd’ using rmarkdown Error: processing vignette 'analysing-scRNAseq.Rmd' failed with diagnostics: Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed. --- failed re-building ‘analysing-scRNAseq.Rmd’ --- re-building ‘reanalysing-public-data.Rmd’ using rmarkdown Error: processing vignette 'reanalysing-public-data.Rmd' failed with diagnostics: Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed. --- failed re-building ‘reanalysing-public-data.Rmd’ --- re-building ‘using-reactomegsa.Rmd’ using rmarkdown Error: processing vignette 'using-reactomegsa.Rmd' failed with diagnostics: Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed. --- failed re-building ‘using-reactomegsa.Rmd’ SUMMARY: processing the following files failed: ‘analysing-scRNAseq.Rmd’ ‘reanalysing-public-data.Rmd’ ‘using-reactomegsa.Rmd’ Error: Vignette re-building failed. Execution halted