############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data PRONE ### ############################################################################## ############################################################################## * checking for file ‘PRONE/DESCRIPTION’ ... OK * preparing ‘PRONE’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘Differential_Expression.Rmd’ using rmarkdown Error: processing vignette 'Differential_Expression.Rmd' failed with diagnostics: Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed. --- failed re-building ‘Differential_Expression.Rmd’ --- re-building ‘Imputation.Rmd’ using rmarkdown Error: processing vignette 'Imputation.Rmd' failed with diagnostics: Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed. --- failed re-building ‘Imputation.Rmd’ --- re-building ‘Normalization.Rmd’ using rmarkdown Error: processing vignette 'Normalization.Rmd' failed with diagnostics: Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed. --- failed re-building ‘Normalization.Rmd’ --- re-building ‘PRONE.Rmd’ using rmarkdown Error: processing vignette 'PRONE.Rmd' failed with diagnostics: Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed. --- failed re-building ‘PRONE.Rmd’ --- re-building ‘Preprocessing.Rmd’ using rmarkdown Error: processing vignette 'Preprocessing.Rmd' failed with diagnostics: Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed. --- failed re-building ‘Preprocessing.Rmd’ --- re-building ‘Spike_In_Data.Rmd’ using rmarkdown Error: processing vignette 'Spike_In_Data.Rmd' failed with diagnostics: Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed. --- failed re-building ‘Spike_In_Data.Rmd’ SUMMARY: processing the following files failed: ‘Differential_Expression.Rmd’ ‘Imputation.Rmd’ ‘Normalization.Rmd’ ‘PRONE.Rmd’ ‘Preprocessing.Rmd’ ‘Spike_In_Data.Rmd’ Error: Vignette re-building failed. Execution halted