##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data GOstats
###
##############################################################################
##############################################################################
* checking for file ‘GOstats/DESCRIPTION’ ... OK
* preparing ‘GOstats’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘GOstatsForUnsupportedOrganisms.Rmd’ using rmarkdown
Warning: call dbDisconnect() when finished working with a connection
[WARNING] This document format requires a nonempty
element.
Defaulting to 'GOstatsForUnsupportedOrganisms.knit' as the title.
To specify a title, use 'title' in metadata or --metadata title="...".
--- finished re-building ‘GOstatsForUnsupportedOrganisms.Rmd’
--- re-building ‘GOstatsHyperG.Rmd’ using rmarkdown
--- finished re-building ‘GOstatsHyperG.Rmd’
--- re-building ‘GOvis.Rmd’ using rmarkdown
Warning in doTryCatch(return(expr), name, parentenv, handler) :
"nodeAttrs" is not a graphical parameter
Warning in doTryCatch(return(expr), name, parentenv, handler) :
zero-length arrow is of indeterminate angle and so skipped
Warning in doTryCatch(return(expr), name, parentenv, handler) :
zero-length arrow is of indeterminate angle and so skipped
Warning in doTryCatch(return(expr), name, parentenv, handler) :
zero-length arrow is of indeterminate angle and so skipped
Warning in doTryCatch(return(expr), name, parentenv, handler) :
zero-length arrow is of indeterminate angle and so skipped
Warning in doTryCatch(return(expr), name, parentenv, handler) :
zero-length arrow is of indeterminate angle and so skipped
Warning in doTryCatch(return(expr), name, parentenv, handler) :
zero-length arrow is of indeterminate angle and so skipped
Warning in doTryCatch(return(expr), name, parentenv, handler) :
zero-length arrow is of indeterminate angle and so skipped
Warning in doTryCatch(return(expr), name, parentenv, handler) :
zero-length arrow is of indeterminate angle and so skipped