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### Running command:
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###   /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data --md5 AnnotationForge
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* checking for file ‘AnnotationForge/DESCRIPTION’ ... OK
* preparing ‘AnnotationForge’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... OK
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSIS.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/ARABIDOPSISCHIP.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/BASEPKG.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/COELICOLOR.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/GO.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/INPARANOID.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/KEGG.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/MALARIA.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/NCBICHIP.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/NCBIORG.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/NOCHIPSCHEMA.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/NOSCHEMA.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/ORGANISM.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/ORTHOLOGY.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/PFAM.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/YEAST.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/YEASTCHIP.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/AnnDbPkg-templates/YEASTNCBI.DB/inst/extdata’ is empty
WARNING: directory ‘AnnotationForge/inst/ProbePkg-template/data’ is empty
* adding MD5 file
* building ‘AnnotationForge_1.48.0.tar.gz’