############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data AnVILAz ### ############################################################################## ############################################################################## * checking for file ‘AnVILAz/DESCRIPTION’ ... OK * preparing ‘AnVILAz’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘AnVILAzWorkspaces.Rmd’ using rmarkdown Error: processing vignette 'AnVILAzWorkspaces.Rmd' failed with diagnostics: Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed. Error in eval(x, envir = envir) : object 'az_ok' not found Error in eval(x, envir = envir) : object 'az_ok' not found Error in eval(x, envir = envir) : object 'az_ok' not found Error in eval(x, envir = envir) : object 'az_ok' not found Error in eval(x, envir = envir) : object 'az_ok' not found Error in eval(x, envir = envir) : object 'az_ok' not found Error in eval(x, envir = envir) : object 'az_ok' not found Error in eval(x, envir = envir) : object 'az_ok' not found --- failed re-building ‘AnVILAzWorkspaces.Rmd’ --- re-building ‘IntroductionToAnVILAz.Rmd’ using rmarkdown Error: processing vignette 'IntroductionToAnVILAz.Rmd' failed with diagnostics: Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed. Error in eval(x, envir = envir) : object 'az_ok' not found Error in eval(x, envir = envir) : object 'az_ok' not found Error in eval(x, envir = envir) : object 'az_ok' not found Error in eval(x, envir = envir) : object 'az_ok' not found Error in eval(x, envir = envir) : object 'az_ok' not found Error in eval(x, envir = envir) : object 'az_ok' not found Error in eval(x, envir = envir) : object 'az_ok' not found Error in eval(x, envir = envir) : object 'az_ok' not found Error in eval(x, envir = envir) : object 'az_ok' not found Error in eval(x, envir = envir) : object 'az_ok' not found Error in eval(x, envir = envir) : object 'az_ok' not found Error in eval(x, envir = envir) : object 'az_ok' not found Error in eval(x, envir = envir) : object 'az_ok' not found Error in eval(x, envir = envir) : object 'az_ok' not found --- failed re-building ‘IntroductionToAnVILAz.Rmd’ SUMMARY: processing the following files failed: ‘AnVILAzWorkspaces.Rmd’ ‘IntroductionToAnVILAz.Rmd’ Error: Vignette re-building failed. Execution halted