############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data AlphaMissenseR ### ############################################################################## ############################################################################## * checking for file ‘AlphaMissenseR/DESCRIPTION’ ... OK * preparing ‘AlphaMissenseR’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘alphafold.Rmd’ using rmarkdown Error: processing vignette 'alphafold.Rmd' failed with diagnostics: Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed. --- failed re-building ‘alphafold.Rmd’ --- re-building ‘benchmarking.Rmd’ using rmarkdown Error: processing vignette 'benchmarking.Rmd' failed with diagnostics: Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed. --- failed re-building ‘benchmarking.Rmd’ --- re-building ‘clinvar.Rmd’ using rmarkdown Error: processing vignette 'clinvar.Rmd' failed with diagnostics: Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed. --- failed re-building ‘clinvar.Rmd’ --- re-building ‘introduction.Rmd’ using rmarkdown Error: processing vignette 'introduction.Rmd' failed with diagnostics: Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed. --- failed re-building ‘introduction.Rmd’ --- re-building ‘issues.Rmd’ using rmarkdown Error: processing vignette 'issues.Rmd' failed with diagnostics: Pandoc is required to build R Markdown vignettes but not available. Please make sure it is installed. --- failed re-building ‘issues.Rmd’ SUMMARY: processing the following files failed: ‘alphafold.Rmd’ ‘benchmarking.Rmd’ ‘clinvar.Rmd’ ‘introduction.Rmd’ ‘issues.Rmd’ Error: Vignette re-building failed. Execution halted