############################################################################## ############################################################################## ### ### Running command: ### ### /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD INSTALL ChemmineR ### ############################################################################## ############################################################################## * installing to library ‘/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library’ * installing *source* package ‘ChemmineR’ ... ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.2.0-23ubuntu4) 13.2.0’ g++ -std=gnu++17 -I"/home/rapidbuild/bbs-3.21-bioc-rapid/R/include" -DNDEBUG -I'/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/Rcpp/include' -I'/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include' -I/usr/local/include -DNO_MAIN -DNO_DEBUG -DSTRICT_R_HEADERS -DR_NO_REMAP -fpic -g -O2 -Wall -DR_NO_REMAP -c DisjointSets.cpp -o DisjointSets.o g++ -std=gnu++17 -I"/home/rapidbuild/bbs-3.21-bioc-rapid/R/include" -DNDEBUG -I'/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/Rcpp/include' -I'/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include' -I/usr/local/include -DNO_MAIN -DNO_DEBUG -DSTRICT_R_HEADERS -DR_NO_REMAP -fpic -g -O2 -Wall -DR_NO_REMAP -c cluster.cc -o cluster.o cluster.cc: In function ‘int nbr_intersect(std::vector&, std::vector&)’: cluster.cc:118:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 118 | while (i < nbrs1.size() and j < nbrs2.size()) { | ~~^~~~~~~~~~~~~~ cluster.cc:118:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 118 | while (i < nbrs1.size() and j < nbrs2.size()) { | ~~^~~~~~~~~~~~~~ cluster.cc: In function ‘int contains(int, std::vector&)’: cluster.cc:131:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 131 | for(int i=0; i < list.size(); i++) | ~~^~~~~~~~~~~~~ cluster.cc: In function ‘DisjointSets cluster(int, int, int, int)’: cluster.cc:267:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 267 | for (int j = 0; j < nbr_list[i].size(); j ++) { | ~~^~~~~~~~~~~~~~~~~~~~ cluster.cc: In function ‘void loadNNMatrix(int, int, int, SEXP)’: cluster.cc:284:28: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 284 | for(unsigned i=0; i::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 298 | if(nbrs.size() < minNbrs) // will end up a singleton | ~~~~~~~~~~~~^~~~~~~~~ cluster.cc: In function ‘void loadNNList(int, int, SEXP)’: cluster.cc:314:28: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 314 | for(unsigned i=0; i::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 332 | if(nbrs.size() < minNbrs) // will end up a singleton | ~~~~~~~~~~~~^~~~~~~~~ cluster.cc: In function ‘SEXPREC* jarvis_patrick(SEXP, SEXP, SEXP, SEXP, SEXP)’: cluster.cc:390:28: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 390 | for(unsigned i=0; i::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses 194 | failed ************ (Pred::************ | ^~~~~~~~~~~~~~~~~~~ | - 195 | assert_arg( void (*)(Pred), typename assert_arg_pred::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 | ); | ~ | - /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses] 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses 199 | failed ************ (boost::mpl::not_::************ | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ | - 200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not::type ) | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 | ); | ~ | - In file included from /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/bind/mem_fn.hpp:25, from /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/mem_fn.hpp:22, from /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/function/detail/prologue.hpp:19, from /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/function.hpp:30, from /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/detail/find_iterator.hpp:18, from /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/find_iterator.hpp:24, from /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:27, from /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/split.hpp:16, from /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string.hpp:23: /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/get_pointer.hpp:48:40: warning: ‘template class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations] 48 | template T * get_pointer(std::auto_ptr const& p) | ^~~~~~~~ In file included from /usr/include/c++/13/memory:78, from /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/function/function_base.hpp:34, from /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/function/detail/prologue.hpp:18: /usr/include/c++/13/bits/unique_ptr.h:65:28: note: declared here 65 | template class auto_ptr; | ^~~~~~~~ In file included from /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/assert.hpp:35, from /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept_check.hpp:20, from /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/range/concepts.hpp:19, from /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/range/size_type.hpp:20, from /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/range/size.hpp:21, from /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/range/functions.hpp:20, from /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/range/iterator_range_core.hpp:38: /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::constraint::failed() [with Model = boost::algorithm::FinderConcept >, const char*>]’: /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:81:13: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = const char*&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = const char*&; PredicateT = detail::is_any_ofF]’ cstrsplit.cc:14:15: required from here /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp:65:52: warning: ‘this’ pointer is null [-Wnonnull] 65 | static void failed() { ((Model*)0)->constraints(); } | ~~~~~~~~~~~~~~~~~~~~~~~~^~ In file included from /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:26: /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/concept.hpp:40:18: note: in a call to non-static member function ‘void boost::algorithm::FinderConcept::constraints() [with FinderT = boost::algorithm::detail::token_finderF >; IteratorT = const char*]’ 40 | void constraints() | ^~~~~~~~~~~ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]’: /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept_check.hpp:167:5: required from ‘struct boost::CopyConstructible’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/range/concepts.hpp:125:16: required from ‘struct boost::range_detail::IncrementableIteratorConcept’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = const char*&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = const char*&; PredicateT = detail::is_any_ofF]’ cstrsplit.cc:14:15: required from here /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ In file included from /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept_check.hpp:31: /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::CopyConstructible]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]’: /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::Convertible]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_)>’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/iterator/iterator_concepts.hpp:114:7: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = const char*&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = const char*&; PredicateT = detail::is_any_ofF]’ cstrsplit.cc:14:15: required from here /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::Convertible]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::Convertible]’: /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/iterator/iterator_concepts.hpp:114:7: required from ‘struct boost::range_detail::IncrementableIteratorConcept’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = const char*&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = const char*&; PredicateT = detail::is_any_ofF]’ cstrsplit.cc:14:15: required from here /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::incrementable_traversal_tag]’ 37 | ~model() | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 208 | BOOST_CONCEPT_USAGE(Convertible) { | ^~~~~~~~~~~~~~~~~~~ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]’: /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/range/concepts.hpp:136:13: required from ‘struct boost::range_detail::IncrementableIteratorConcept’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = const char*&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = const char*&; PredicateT = detail::is_any_ofF]’ cstrsplit.cc:14:15: required from here /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::IncrementableIteratorConcept]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]’: /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept_check.hpp:233:5: required from ‘struct boost::EqualityComparable’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = const char*&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = const char*&; PredicateT = detail::is_any_ofF]’ cstrsplit.cc:14:15: required from here /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::EqualityComparable]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]’: /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::Convertible]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_)>’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/range/concepts.hpp:152:13: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = const char*&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = const char*&; PredicateT = detail::is_any_ofF]’ cstrsplit.cc:14:15: required from here /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::Convertible]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::Convertible]’: /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/range/concepts.hpp:152:13: required from ‘struct boost::range_detail::SinglePassIteratorConcept’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_)>’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/range/concepts.hpp:278:9: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = const char*&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = const char*&; PredicateT = detail::is_any_ofF]’ cstrsplit.cc:14:15: required from here /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::single_pass_traversal_tag]’ 37 | ~model() | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 208 | BOOST_CONCEPT_USAGE(Convertible) { | ^~~~~~~~~~~~~~~~~~~ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]’: /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/range/concepts.hpp:158:13: required from ‘struct boost::range_detail::SinglePassIteratorConcept’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_)>’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/range/concepts.hpp:278:9: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = const char*&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = const char*&; PredicateT = detail::is_any_ofF]’ cstrsplit.cc:14:15: required from here /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::SinglePassIteratorConcept]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::range_detail::SinglePassIteratorConcept]’: /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/range/concepts.hpp:278:9: required from ‘struct boost::SinglePassRangeConcept >’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::SinglePassRangeConcept >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >::value’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >)>’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/range/algorithm/equal.hpp:174:13: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = const char*&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = const char*&; PredicateT = detail::is_any_ofF]’ cstrsplit.cc:14:15: required from here /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::SinglePassIteratorConcept::~SinglePassIteratorConcept() [with Iterator = const char*]’ 37 | ~model() | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/range/concepts.hpp:158:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 158 | BOOST_CONCEPT_USAGE(SinglePassIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >]’: /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/range/concepts.hpp:284:9: required from ‘struct boost::SinglePassRangeConcept >’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::SinglePassRangeConcept >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >::value’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_ >)>’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/range/algorithm/equal.hpp:174:13: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = const char*&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = const char*&; PredicateT = detail::is_any_ofF]’ cstrsplit.cc:14:15: required from here /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::SinglePassRangeConcept >]’ 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement::failed() [with Model = boost::SinglePassRangeConcept >]’: /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/range/algorithm/equal.hpp:174:13: required from ‘bool boost::range::equal(const SinglePassRange1&, const SinglePassRange2&) [with SinglePassRange1 = boost::iterator_range; SinglePassRange2 = boost::iterator_range]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/range/iterator_range_core.hpp:644:32: required from ‘bool boost::operator==(const iterator_range&, const iterator_range&) [with Iterator1T = const char*; Iterator2T = const char*]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/find_iterator.hpp:359:32: required from ‘bool boost::algorithm::split_iterator::equal(const boost::algorithm::split_iterator&) const [with IteratorT = const char*]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:649:26: required from ‘static bool boost::iterators::iterator_core_access::equal(const Facade1&, const Facade2&, mpl_::true_) [with Facade1 = boost::algorithm::split_iterator; Facade2 = boost::algorithm::split_iterator; mpl_::true_ = mpl_::bool_]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:981:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator==(const iterator_facade&, const iterator_facade&) [with Derived1 = boost::algorithm::split_iterator; V1 = const boost::iterator_range; TC1 = forward_traversal_tag; Reference1 = const boost::iterator_range&; Difference1 = long int; Derived2 = boost::algorithm::split_iterator; V2 = const boost::iterator_range; TC2 = forward_traversal_tag; Reference2 = const boost::iterator_range&; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/iterator/iterator_adaptor.hpp:305:29: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = const char*&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = const char*&; PredicateT = detail::is_any_ofF]’ cstrsplit.cc:14:15: required from here /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull] 50 | static void failed() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::SinglePassRangeConcept::~SinglePassRangeConcept() [with T = const boost::iterator_range]’ 37 | ~model() | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/range/concepts.hpp:284:9: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 284 | BOOST_CONCEPT_USAGE(SinglePassRangeConcept) | ^~~~~~~~~~~~~~~~~~~ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::CopyConstructible]’: /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept_check.hpp:167:5: required from ‘struct boost::CopyConstructible’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/range/concepts.hpp:125:16: required from ‘struct boost::range_detail::IncrementableIteratorConcept’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = const char*&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = const char*&; PredicateT = detail::is_any_ofF]’ cstrsplit.cc:14:15: required from here /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::CopyConstructible::~CopyConstructible() [with TT = const char*]’ 37 | ~model() | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept_check.hpp:167:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 167 | BOOST_CONCEPT_USAGE(CopyConstructible) { | ^~~~~~~~~~~~~~~~~~~ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::Convertible]’: /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::Convertible]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 19 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = const char*&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = const char*&; PredicateT = detail::is_any_ofF]’ cstrsplit.cc:14:15: required from here /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::incrementable_traversal_tag]’ 37 | ~model() | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 208 | BOOST_CONCEPT_USAGE(Convertible) { | ^~~~~~~~~~~~~~~~~~~ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::IncrementableIteratorConcept]’: /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/range/concepts.hpp:136:13: required from ‘struct boost::range_detail::IncrementableIteratorConcept’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = const char*&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = const char*&; PredicateT = detail::is_any_ofF]’ cstrsplit.cc:14:15: required from here /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::IncrementableIteratorConcept::~IncrementableIteratorConcept() [with Iterator = const char*]’ 37 | ~model() | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/range/concepts.hpp:136:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 136 | BOOST_CONCEPT_USAGE(IncrementableIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::EqualityComparable]’: /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept_check.hpp:233:5: required from ‘struct boost::EqualityComparable’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = const char*&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = const char*&; PredicateT = detail::is_any_ofF]’ cstrsplit.cc:14:15: required from here /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::EqualityComparable::~EqualityComparable() [with TT = const char*]’ 37 | ~model() | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept_check.hpp:233:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 233 | BOOST_CONCEPT_USAGE(EqualityComparable) { | ^~~~~~~~~~~~~~~~~~~ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::Convertible]’: /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::Convertible]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = const char*&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = const char*&; PredicateT = detail::is_any_ofF]’ cstrsplit.cc:14:15: required from here /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::single_pass_traversal_tag]’ 37 | ~model() | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 208 | BOOST_CONCEPT_USAGE(Convertible) { | ^~~~~~~~~~~~~~~~~~~ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::range_detail::SinglePassIteratorConcept]’: /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/range/concepts.hpp:158:13: required from ‘struct boost::range_detail::SinglePassIteratorConcept’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::range_detail::SinglePassIteratorConcept]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied >::value’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied >’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = const char*&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = const char*&; PredicateT = detail::is_any_ofF]’ cstrsplit.cc:14:15: required from here /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::SinglePassIteratorConcept::~SinglePassIteratorConcept() [with Iterator = const char*]’ 37 | ~model() | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/range/concepts.hpp:158:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 158 | BOOST_CONCEPT_USAGE(SinglePassIteratorConcept) | ^~~~~~~~~~~~~~~~~~~ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements::~usage_requirements() [with Model = boost::SinglePassRangeConcept >]’: /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement::failed() [with Model = boost::concepts::usage_requirements > >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/range/concepts.hpp:284:9: required from ‘struct boost::SinglePassRangeConcept >’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, wrap_constraints*) [with Model = boost::SinglePassRangeConcept >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied > >::value’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied > >’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable::type>::type boost::iterators::operator!=(const iterator_facade&, const iterator_facade&) [with Derived1 = transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string; TC1 = forward_traversal_tag; Reference1 = std::__cxx11::basic_string; Difference1 = long int; Derived2 = transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string; TC2 = forward_traversal_tag; Reference2 = std::__cxx11::basic_string; Difference2 = long int; typename detail::enable_if_interoperable::type>::type = bool; typename boost::mpl::apply2::type = bool]’ /usr/include/c++/13/bits/stl_vector.h:1671:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >]’ /usr/include/c++/13/bits/stl_vector.h:711:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator, const char*>, boost::algorithm::split_iterator, boost::use_default, boost::use_default>; = void; _Tp = std::__cxx11::basic_string; _Alloc = std::allocator >; allocator_type = std::allocator >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector >; RangeT = const char*&; FinderT = detail::token_finderF >]’ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, token_compress_mode_type) [with SequenceSequenceT = std::vector >; RangeT = const char*&; PredicateT = detail::is_any_ofF]’ cstrsplit.cc:14:15: required from here /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull] 20 | ~usage_requirements() { ((Model*)0)->~Model(); } | ~~~~~~~~~~~~~~~~~~~^~ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::SinglePassRangeConcept::~SinglePassRangeConcept() [with T = const boost::iterator_range]’ 37 | ~model() | ^ /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include/boost/range/concepts.hpp:284:9: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’ 284 | BOOST_CONCEPT_USAGE(SinglePassRangeConcept) | ^~~~~~~~~~~~~~~~~~~ g++ -std=gnu++17 -I"/home/rapidbuild/bbs-3.21-bioc-rapid/R/include" -DNDEBUG -I'/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/Rcpp/include' -I'/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include' -I/usr/local/include -DNO_MAIN -DNO_DEBUG -DSTRICT_R_HEADERS -DR_NO_REMAP -fpic -g -O2 -Wall -DR_NO_REMAP -c desc.cc -o desc.o desc.cc: In function ‘SEXPREC* genAPDescriptor(SEXP)’: desc.cc:249:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 249 | for(int i=0; i < descs.size(); i++) | ~~^~~~~~~~~~~~~~ g++ -std=gnu++17 -I"/home/rapidbuild/bbs-3.21-bioc-rapid/R/include" -DNDEBUG -I'/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/Rcpp/include' -I'/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include' -I/usr/local/include -DNO_MAIN -DNO_DEBUG -DSTRICT_R_HEADERS -DR_NO_REMAP -fpic -g -O2 -Wall -DR_NO_REMAP -c fingerprints.cc -o fingerprints.o fingerprints.cc: In function ‘SEXPREC* uniquifyAtomPairs(SEXP)’: fingerprints.cc:138:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 138 | for(int i=0; i < aps.size(); i++) | ~~^~~~~~~~~~~~ fingerprints.cc:145:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 145 | for(int i=0; i < aps.size(); i++){ | ~~^~~~~~~~~~~~ fingerprints.cc:158:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 158 | for(int i=0; i < aps.size(); i++){ | ~~^~~~~~~~~~~~ g++ -std=gnu++17 -I"/home/rapidbuild/bbs-3.21-bioc-rapid/R/include" -DNDEBUG -I'/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/Rcpp/include' -I'/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include' -I/usr/local/include -DNO_MAIN -DNO_DEBUG -DSTRICT_R_HEADERS -DR_NO_REMAP -fpic -g -O2 -Wall -DR_NO_REMAP -c formats.cc -o formats.o formats.cc: In function ‘int sdf_iter(std::fstream&, std::string&, int&)’: formats.cc:237:24: warning: ‘char* __builtin_strncpy(char*, const char*, long unsigned int)’ output may be truncated copying 4 bytes from a string of length 100001 [-Wstringop-truncation] 237 | strncpy(buf_4, line, 4); | ^ g++ -std=gnu++17 -I"/home/rapidbuild/bbs-3.21-bioc-rapid/R/include" -DNDEBUG -I'/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/Rcpp/include' -I'/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include' -I/usr/local/include -DNO_MAIN -DNO_DEBUG -DSTRICT_R_HEADERS -DR_NO_REMAP -fpic -g -O2 -Wall -DR_NO_REMAP -c molecule.cc -o molecule.o g++ -std=gnu++17 -I"/home/rapidbuild/bbs-3.21-bioc-rapid/R/include" -DNDEBUG -I'/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/Rcpp/include' -I'/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include' -I/usr/local/include -DNO_MAIN -DNO_DEBUG -DSTRICT_R_HEADERS -DR_NO_REMAP -fpic -g -O2 -Wall -DR_NO_REMAP -c r_wrap.cc -o r_wrap.o r_wrap.cc:758: warning: "R_NO_REMAP" redefined 758 | # define R_NO_REMAP | : note: this is the location of the previous definition r_wrap.cc:761: warning: "STRICT_R_HEADERS" redefined 761 | # define STRICT_R_HEADERS | : note: this is the location of the previous definition g++ -std=gnu++17 -I"/home/rapidbuild/bbs-3.21-bioc-rapid/R/include" -DNDEBUG -I'/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/Rcpp/include' -I'/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include' -I/usr/local/include -DNO_MAIN -DNO_DEBUG -DSTRICT_R_HEADERS -DR_NO_REMAP -fpic -g -O2 -Wall -DR_NO_REMAP -c script.cc -o script.o In file included from script.cc:2: desc.h:39:13: warning: ‘elements’ defined but not used [-Wunused-variable] 39 | static char elements[112][3] = { | ^~~~~~~~ g++ -std=gnu++17 -I"/home/rapidbuild/bbs-3.21-bioc-rapid/R/include" -DNDEBUG -I'/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/Rcpp/include' -I'/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/BH/include' -I/usr/local/include -DNO_MAIN -DNO_DEBUG -DSTRICT_R_HEADERS -DR_NO_REMAP -fpic -g -O2 -Wall -DR_NO_REMAP -c similarity.cc -o similarity.o In file included from similarity.cc:1: desc.h:39:13: warning: ‘elements’ defined but not used [-Wunused-variable] 39 | static char elements[112][3] = { | ^~~~~~~~ g++ -std=gnu++17 -shared -L/usr/local/lib -o ChemmineR.so DisjointSets.o cluster.o cstrsplit.o desc.o fingerprints.o formats.o molecule.o r_wrap.o script.o similarity.o installing to /media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/R/site-library/00LOCK-ChemmineR/00new/ChemmineR/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ChemmineR)