############################################################################## ############################################################################## ### ### Running command: ### ### /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data Rsubread ### ############################################################################## ############################################################################## * checking for file ‘Rsubread/DESCRIPTION’ ... OK * preparing ‘Rsubread’: * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘Rsubread.Rnw’ using Sweave trying URL 'https://shilab-bioinformatics.github.io/cellCounts-Example/cellCounts-Example.zip' Content type 'application/zip' length 74690393 bytes (71.2 MB) ================================================== downloaded 71.2 MB Error: processing vignette 'Rsubread.Rnw' failed with diagnostics: chunk 7 Error in cellCounts(paste0(temp.dir, "/chr1"), sample.sheet, nthreads = 1, : Error: index '/tmp/Rtmpi5tqkg/chr1' is not found. --- failed re-building ‘Rsubread.Rnw’ SUMMARY: processing the following file failed: ‘Rsubread.Rnw’ Error: Vignette re-building failed. Execution halted