############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf sva.buildbin-libdir && mkdir sva.buildbin-libdir && E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD INSTALL --build --library=sva.buildbin-libdir sva_3.55.0.tar.gz ### ############################################################################## ############################################################################## * installing *source* package 'sva' ... ** using staged installation ** libs using C compiler: 'gcc.exe (GCC) 13.3.0' gcc -I"E:/biocbuild/bbs-3.21-bioc/R/include" -DNDEBUG -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c sva.c -o sva.o sva.c:27:34: warning: missing braces around initializer [-Wmissing-braces] 27 | R_CallMethodDef callMethods[] = { | ^ gcc -shared -s -static-libgcc -o sva.dll tmp.def sva.o -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib -LE:/biocbuild/bbs-3.21-bioc/R/bin/x64 -lR installing to E:/biocbuild/bbs-3.21-bioc/meat/sva.buildbin-libdir/00LOCK-sva/00new/sva/libs/x64 ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * MD5 sums packaged installation of 'sva' as sva_3.55.0.zip * DONE (sva)