############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data sitadela ### ############################################################################## ############################################################################## * checking for file ‘sitadela/DESCRIPTION’ ... OK * preparing ‘sitadela’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘sitadela.Rmd’ using rmarkdown Warning: program compiled against libxml 212 using older 211 Quitting from lines 191-209 [example-1] (sitadela.Rmd) Error: processing vignette 'sitadela.Rmd' failed with diagnostics: Transcript annotation for mm10 from ensembl version 100 is required in order to build predefined merged transcript regions for read counting. Please rerun the addAnnotation function with appropriate parameters. --- failed re-building ‘sitadela.Rmd’ SUMMARY: processing the following file failed: ‘sitadela.Rmd’ Error: Vignette re-building failed. Execution halted