############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD INSTALL rhdf5client ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/R/R-4.5.0-devel_2024-11-24/site-library’ * installing *source* package ‘rhdf5client’ ... ** using staged installation ** libs using C compiler: ‘aarch64-unknown-linux-gnu-gcc (GCC) 14.2.0’ /opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-gcc -I"/home/biocbuild/R/R/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -Wall -Werror=format-security -c extract.c -o extract.o extract.c: In function ‘extractBin’: extract.c:101:52: warning: ‘rip’ may be used uninitialized [-Wmaybe-uninitialized] 101 | A[ia] = (Rf_isReal(resvec_sexp) ? rdp[ib] : rip[ib]); | ^ extract.c:89:8: note: ‘rip’ was declared here 89 | int *rip; | ^~~ extract.c:101:42: warning: ‘rdp’ may be used uninitialized [-Wmaybe-uninitialized] 101 | A[ia] = (Rf_isReal(resvec_sexp) ? rdp[ib] : rip[ib]); | ^ extract.c:90:11: note: ‘rdp’ was declared here 90 | double *rdp; | ^~~ /opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-gcc -shared -L/home/biocbuild/R/R/lib -L/usr/local/lib -o rhdf5client.so extract.o -L/home/biocbuild/R/R/lib -lR installing to /home/biocbuild/R/R-4.5.0-devel_2024-11-24/site-library/00LOCK-rhdf5client/00new/rhdf5client/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rhdf5client)