############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data pareg ### ############################################################################## ############################################################################## * checking for file ‘pareg/DESCRIPTION’ ... OK * preparing ‘pareg’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘pareg.Rmd’ using rmarkdown 2024-12-24 17:11:38.177 R[99479:175514674] XType: Using static font registry. Retrieving notices: ...working... done Channels: - anaconda Platform: osx-arm64 Collecting package metadata (repodata.json): ...working... done Solving environment: ...working... done ## Package Plan ## environment location: /Users/biocbuild/Library/Caches/org.R-project.R/R/basilisk/1.19.0/pareg/1.11.1/pareg added / updated specs: - python=3.10.14 The following NEW packages will be INSTALLED: bzip2 anaconda/osx-arm64::bzip2-1.0.8-h80987f9_6 ca-certificates anaconda/osx-arm64::ca-certificates-2024.11.26-hca03da5_0 libffi anaconda/osx-arm64::libffi-3.4.4-hca03da5_1 ncurses anaconda/osx-arm64::ncurses-6.4-h313beb8_0 openssl anaconda/osx-arm64::openssl-3.0.15-h80987f9_0 pip anaconda/osx-arm64::pip-24.2-py310hca03da5_0 python anaconda/osx-arm64::python-3.10.14-hb885b13_1 readline anaconda/osx-arm64::readline-8.2-h1a28f6b_0 setuptools anaconda/osx-arm64::setuptools-75.1.0-py310hca03da5_0 sqlite anaconda/osx-arm64::sqlite-3.45.3-h80987f9_0 tk anaconda/osx-arm64::tk-8.6.14-h6ba3021_0 tzdata anaconda/noarch::tzdata-2024b-h04d1e81_0 wheel anaconda/osx-arm64::wheel-0.44.0-py310hca03da5_0 xz anaconda/osx-arm64::xz-5.4.6-h80987f9_1 zlib anaconda/osx-arm64::zlib-1.2.13-h18a0788_1 Preparing transaction: ...working... done Verifying transaction: ...working... done Executing transaction: ...working... done Channels: - anaconda Platform: osx-arm64 Collecting package metadata (repodata.json): ...working... done Solving environment: ...working... done # All requested packages already installed. Channels: - anaconda Platform: osx-arm64 Collecting package metadata (repodata.json): ...working... done Solving environment: ...working... failed LibMambaUnsatisfiableError: Encountered problems while solving: - package tensorflow-base-2.10.0-eigen_py38h4111cb8_0 requires python >=3.8,<3.9.0a0, but none of the providers can be installed Could not solve for environment specs The following packages are incompatible ├─ python 3.10.14** is installable and it requires │ └─ openssl >=3.0.13,<4.0a0 , which can be installed; └─ tensorflow 2.10.0** is not installable because there are no viable options ├─ tensorflow 2.10.0 would require │ └─ tensorflow-base 2.10.0 eigen_py38h4111cb8_0, which requires │ └─ python >=3.8,<3.9.0a0 , which conflicts with any installable versions previously reported; ├─ tensorflow 2.10.0 would require │ └─ tensorflow-base 2.10.0 eigen_py310h4111cb8_0, which requires │ └─ openssl >=1.1.1s,<1.1.2a , which conflicts with any installable versions previously reported; └─ tensorflow 2.10.0 would require └─ tensorflow-base 2.10.0 eigen_py39h4111cb8_0, which requires └─ python >=3.9,<3.10.0a0 , which conflicts with any installable versions previously reported. Quitting from lines 145-150 [unnamed-chunk-9] (pareg.Rmd) Error: processing vignette 'pareg.Rmd' failed with diagnostics: one or more Python packages failed to install [error code 1] --- failed re-building ‘pareg.Rmd’ --- re-building ‘pathway_similarities.Rmd’ using rmarkdown --- finished re-building ‘pathway_similarities.Rmd’ SUMMARY: processing the following file failed: ‘pareg.Rmd’ Error: Vignette re-building failed. Execution halted