##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data orthos
###
##############################################################################
##############################################################################


* checking for file ‘orthos/DESCRIPTION’ ... OK
* preparing ‘orthos’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘orthosIntro.Rmd’ using rmarkdown
Channels:
 - conda-forge
Platform: linux-aarch64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done

## Package Plan ##

  environment location: /home/biocbuild/.cache/R/basilisk/1.19.0/orthos/1.5.0/orthos

  added / updated specs:
    - python=3.10.14


The following NEW packages will be INSTALLED:

  _openmp_mutex      conda-forge/linux-aarch64::_openmp_mutex-4.5-2_gnu 
  bzip2              conda-forge/linux-aarch64::bzip2-1.0.8-h68df207_7 
  ca-certificates    conda-forge/linux-aarch64::ca-certificates-2024.12.14-hcefe29a_0 
  ld_impl_linux-aar~ conda-forge/linux-aarch64::ld_impl_linux-aarch64-2.43-h80caac9_2 
  libffi             conda-forge/linux-aarch64::libffi-3.4.2-h3557bc0_5 
  libgcc             conda-forge/linux-aarch64::libgcc-14.2.0-he277a41_1 
  libgcc-ng          conda-forge/linux-aarch64::libgcc-ng-14.2.0-he9431aa_1 
  libgomp            conda-forge/linux-aarch64::libgomp-14.2.0-he277a41_1 
  liblzma            conda-forge/linux-aarch64::liblzma-5.6.3-h86ecc28_1 
  liblzma-devel      conda-forge/linux-aarch64::liblzma-devel-5.6.3-h86ecc28_1 
  libnsl             conda-forge/linux-aarch64::libnsl-2.0.1-h31becfc_0 
  libsqlite          conda-forge/linux-aarch64::libsqlite-3.47.2-h5eb1b54_0 
  libuuid            conda-forge/linux-aarch64::libuuid-2.38.1-hb4cce97_0 
  libxcrypt          conda-forge/linux-aarch64::libxcrypt-4.4.36-h31becfc_1 
  libzlib            conda-forge/linux-aarch64::libzlib-1.3.1-h86ecc28_2 
  ncurses            conda-forge/linux-aarch64::ncurses-6.5-hcccb83c_1 
  openssl            conda-forge/linux-aarch64::openssl-3.4.0-h86ecc28_0 
  pip                conda-forge/noarch::pip-24.3.1-pyh8b19718_2 
  python             conda-forge/linux-aarch64::python-3.10.14-hbbe8eec_0_cpython 
  readline           conda-forge/linux-aarch64::readline-8.2-h8fc344f_1 
  setuptools         conda-forge/noarch::setuptools-75.6.0-pyhff2d567_1 
  tk                 conda-forge/linux-aarch64::tk-8.6.13-h194ca79_0 
  tzdata             conda-forge/noarch::tzdata-2024b-hc8b5060_0 
  wheel              conda-forge/noarch::wheel-0.45.1-pyhd8ed1ab_1 
  xz                 conda-forge/linux-aarch64::xz-5.6.3-h2dbfc1b_1 
  xz-gpl-tools       conda-forge/linux-aarch64::xz-gpl-tools-5.6.3-h2dbfc1b_1 
  xz-tools           conda-forge/linux-aarch64::xz-tools-5.6.3-h86ecc28_1 


Preparing transaction: ...working... done
Verifying transaction: ...working... done
Executing transaction: ...working... done
Channels:
 - conda-forge
Platform: linux-aarch64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... done


==> WARNING: A newer version of conda exists. <==
    current version: 24.3.0
    latest version: 24.11.2

Please update conda by running

    $ conda update -n base -c conda-forge conda



# All requested packages already installed.

Channels:
 - conda-forge
Platform: linux-aarch64
Collecting package metadata (repodata.json): ...working... done
Solving environment: ...working... failed

LibMambaUnsatisfiableError: Encountered problems while solving:
  - nothing provides requested tensorflow-estimator 2.15.0**
  - nothing provides requested tensorflow-base 2.15.0**
  - nothing provides requested tensorflow 2.15.0**
  - nothing provides requested _libgcc_mutex 0.1**
  - package librsvg-2.58.3-h28f3b4c_0 requires cairo >=1.18.0,<2.0a0, but none of the providers can be installed

Could not solve for environment specs
The following packages are incompatible
├─ _libgcc_mutex 0.1**  does not exist (perhaps a typo or a missing channel);
├─ librsvg 2.58.3**  is installable and it requires
│  └─ cairo >=1.18.0,<2.0a0  with the potential options
│     ├─ cairo 1.18.0 would require
│     │  └─ libxcb >=1.15,<1.16.0a0 , which can be installed;
│     ├─ cairo [1.18.0|1.18.2] would require
│     │  └─ pixman >=0.43.4,<1.0a0 , which can be installed;
│     └─ cairo 1.18.2 would require
│        └─ pixman >=0.44.2,<1.0a0 , which can be installed;
├─ libxcb 1.16**  is not installable because it conflicts with any installable versions previously reported;
├─ pixman 0.43.2**  is not installable because it conflicts with any installable versions previously reported;
├─ tensorflow-base 2.15.0**  does not exist (perhaps a typo or a missing channel);
├─ tensorflow-estimator 2.15.0**  does not exist (perhaps a typo or a missing channel);
└─ tensorflow 2.15.0**  does not exist (perhaps a typo or a missing channel).


Quitting from lines 281-285 [unnamed-chunk-4] (orthosIntro.Rmd)
Error: processing vignette 'orthosIntro.Rmd' failed with diagnostics:
one or more Python packages failed to install [error code 1]
--- failed re-building ‘orthosIntro.Rmd’

SUMMARY: processing the following file failed:
  ‘orthosIntro.Rmd’

Error: Vignette re-building failed.
Execution halted