############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data cTRAP ### ############################################################################## ############################################################################## * checking for file ‘cTRAP/DESCRIPTION’ ... OK * preparing ‘cTRAP’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘cTRAP.Rmd’ using rmarkdown trying URL 'https://www.ncbi.nlm.nih.gov/geo/download/?acc=GSE92742&format=file&file=GSE92742_Broad_LINCS_sig_info.txt.gz' Content type 'application/octet-stream' length 11124404 bytes (10.6 MB) ================================================ downloaded 10.3 MB Quitting from lines 111-124 [CMap metadata conditions] (cTRAP.Rmd) Error: processing vignette 'cTRAP.Rmd' failed with diagnostics: download from 'https://www.ncbi.nlm.nih.gov/geo/download/?acc=GSE92742&format=file&file=GSE92742_Broad_LINCS_sig_info.txt.gz' failed --- failed re-building ‘cTRAP.Rmd’ SUMMARY: processing the following file failed: ‘cTRAP.Rmd’ Error: Vignette re-building failed. Execution halted