############################################################################## ############################################################################## ### ### Running command: ### ### E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD INSTALL PDATK ### ############################################################################## ############################################################################## * installing to library 'E:/biocbuild/bbs-3.21-bioc/R/library' * installing *source* package 'PDATK' ... ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading Warning: replacing previous import 'survival::brier' by 'verification::brier' when loading 'PDATK' Warning: replacing previous import 'limma::logsumexp' by 'mclust::logsumexp' when loading 'genefu' ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Warning: replacing previous import 'survival::brier' by 'verification::brier' when loading 'PDATK' Warning: replacing previous import 'limma::logsumexp' by 'mclust::logsumexp' when loading 'genefu' ** testing if installed package can be loaded from final location Warning: replacing previous import 'survival::brier' by 'verification::brier' when loading 'PDATK' Warning: replacing previous import 'limma::logsumexp' by 'mclust::logsumexp' when loading 'genefu' ** testing if installed package keeps a record of temporary installation path * DONE (PDATK)