############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data MAST ### ############################################################################## ############################################################################## * checking for file ‘MAST/DESCRIPTION’ ... OK * preparing ‘MAST’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘MAITAnalysis.Rmd’ using rmarkdown Warning: code chunks must not depend on the uncached chunk "data" 2025-01-23 16:17:24.163 R[99469:366090447] XType: Using static font registry. Warning: code chunks must not depend on the uncached chunk "zlm" Warning: code chunks must not depend on the uncached chunk "boots" --- finished re-building ‘MAITAnalysis.Rmd’ --- re-building ‘MAST-Intro.Rmd’ using rmarkdown --- finished re-building ‘MAST-Intro.Rmd’ --- re-building ‘MAST-interoperability.Rmd’ using rmarkdown Quitting from lines 73-76 [scaterQC] (MAST-interoperability.Rmd) Error: processing vignette 'MAST-interoperability.Rmd' failed with diagnostics: there is no package called 'scater' --- failed re-building ‘MAST-interoperability.Rmd’ SUMMARY: processing the following file failed: ‘MAST-interoperability.Rmd’ Error: Vignette re-building failed. Execution halted