############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data HiCool ### ############################################################################## ############################################################################## * checking for file ‘HiCool/DESCRIPTION’ ... OK * preparing ‘HiCool’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘HiCool.Rmd’ using rmarkdown python-build: use openssl from homebrew python-build: use readline from homebrew Downloading Python-3.7.12.tar.xz... -> https://www.python.org/ftp/python/3.7.12/Python-3.7.12.tar.xz Installing Python-3.7.12... patching file Doc/library/ctypes.rst patching file Lib/test/test_unicode.py patching file Modules/_ctypes/_ctypes.c patching file Modules/_ctypes/callproc.c patching file Modules/_ctypes/ctypes.h patching file setup.py patching file 'Misc/NEWS.d/next/Core and Builtins/2020-06-30-04-44-29.bpo-41100.PJwA6F.rst' patching file Modules/_decimal/libmpdec/mpdecimal.h patching file setup.py patching file configure python-build: use readline from homebrew python-build: use ncurses from homebrew python-build: use zlib from xcode sdk BUILD FAILED (OS X 12.7.6 using python-build 2.5.7-9-g70b973f) Inspect or clean up the working tree at /tmp/python-build.20250522170431.41207 Results logged to /tmp/python-build.20250522170431.41207.log Last 10 log lines: incomplete block on file /usr/bin/install -c checking for a thread-safe mkdir -p... ./install-sh -c -d checking for --with-pydebug... no checking for --with-assertions... no checking for --enable-optimizations... yes checking for --with-lto... yes checking for llvm-ar... no configure: error: llvm-ar is required for a --with-lto build with clang but could not be found. make: *** No targets specified and no makefile found. Stop. Quitting from HiCool.Rmd:70-80 [unnamed-chunk-3] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: ! installation of Python 3.7.12 failed --- Backtrace: ▆ 1. └─HiCool::HiCool(...) 2. └─basilisk::basiliskStart(env_HiCool) 3. └─basilisk::obtainEnvironmentPath(env) 4. └─basilisk::setupBasiliskEnv(...) 5. ├─base::suppressMessages(install_python(version)) 6. │ └─base::withCallingHandlers(...) 7. └─reticulate::install_python(version) 8. └─reticulate:::stopf("installation of Python %s failed", version) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'HiCool.Rmd' failed with diagnostics: installation of Python 3.7.12 failed --- failed re-building ‘HiCool.Rmd’ SUMMARY: processing the following file failed: ‘HiCool.Rmd’ Error: Vignette re-building failed. Execution halted