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### Running command:
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###   /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data GeneGeneInteR
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* checking for file ‘GeneGeneInteR/DESCRIPTION’ ... OK
* preparing ‘GeneGeneInteR’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘GeneGeneInteR’ ...
** using staged installation
** libs
using C++ compiler: ‘aarch64-unknown-linux-gnu-g++ (GCC) 14.2.0’
/opt/ohpc/pub/compiler/gcc/14.2.0/bin/aarch64-unknown-linux-gnu-g++ -std=gnu++17 -I"/home/biocbuild/R/R/include" -DNDEBUG   -I/usr/local/include    -fPIC  -g -O2  -Wall -Werror=format-security -DR_NO_REMAP -c chclust.cpp -o chclust.o
In file included from chclust.cpp:7:
chclust.cpp: In function ‘SEXPREC* chclust_c(SEXP, SEXP)’:
chclust.cpp:43:29: error: ‘allocVector’ was not declared in this scope; did you mean ‘Rf_allocVector’?
   43 |          PROTECT(eMessage = allocVector(STRSXP, 1));
      |                             ^~~~~~~~~~~
/home/biocbuild/R/R/include/Rinternals.h:388:36: note: in definition of macro ‘PROTECT’
  388 | #define PROTECT(s)      Rf_protect(s)
      |                                    ^
chclust.cpp:44:38: error: ‘mkChar’ was not declared in this scope
   44 |          SET_STRING_ELT(eMessage, 0, mkChar("Error in Conslink C++ code"));
      |                                      ^~~~~~
chclust.cpp:50:29: error: ‘allocVector’ was not declared in this scope; did you mean ‘Rf_allocVector’?
   50 |          PROTECT(eMessage = allocVector(STRSXP, 1));
      |                             ^~~~~~~~~~~
/home/biocbuild/R/R/include/Rinternals.h:388:36: note: in definition of macro ‘PROTECT’
  388 | #define PROTECT(s)      Rf_protect(s)
      |                                    ^
chclust.cpp:51:38: error: ‘mkChar’ was not declared in this scope
   51 |          SET_STRING_ELT(eMessage, 0, mkChar("Error in ConISS C++ code"));
      |                                      ^~~~~~
chclust.cpp:56:26: error: ‘allocVector’ was not declared in this scope; did you mean ‘Rf_allocVector’?
   56 |       PROTECT(eMessage = allocVector(STRSXP, 1));
      |                          ^~~~~~~~~~~
/home/biocbuild/R/R/include/Rinternals.h:388:36: note: in definition of macro ‘PROTECT’
  388 | #define PROTECT(s)      Rf_protect(s)
      |                                    ^
chclust.cpp:57:35: error: ‘mkChar’ was not declared in this scope
   57 |       SET_STRING_ELT(eMessage, 0, mkChar("Unknown clustering method"));
      |                                   ^~~~~~
chclust.cpp:61:20: error: ‘allocVector’ was not declared in this scope; did you mean ‘Rf_allocVector’?
   61 |    PROTECT(sDend = allocVector(REALSXP, nr-1));
      |                    ^~~~~~~~~~~
/home/biocbuild/R/R/include/Rinternals.h:388:36: note: in definition of macro ‘PROTECT’
  388 | #define PROTECT(s)      Rf_protect(s)
      |                                    ^
make: *** [/home/biocbuild/R/R/etc/Makeconf:204: chclust.o] Error 1
ERROR: compilation failed for package ‘GeneGeneInteR’
* removing ‘/home/biocbuild/tmp/Rtmp6Ucg85/Rinst7f062ef2cdf9/GeneGeneInteR’
      -----------------------------------
ERROR: package installation failed