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### Running command:
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###   E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD check --no-multiarch --install=check:EBImage.install-out.txt --library=E:\biocbuild\bbs-3.21-bioc\R\library --no-vignettes --timings EBImage_4.49.0.tar.gz
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* using log directory 'E:/biocbuild/bbs-3.21-bioc/meat/EBImage.Rcheck'
* using R Under development (unstable) (2024-10-26 r87273 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 13.2.0
    GNU Fortran (GCC) 13.2.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* using option '--no-vignettes'
* checking for file 'EBImage/DESCRIPTION' ... OK
* this is package 'EBImage' version '4.49.0'
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'EBImage' can be installed ... OK
* used C compiler: 'gcc.exe (GCC) 13.3.0'
* used C++ compiler: 'G__~1.EXE (GCC) 13.3.0'
* checking installed package size ... OK
* checking package directory ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
  display.Rd: createWidget
  io.Rd: writeTIFF, readJPEG, writeJPEG, readPNG, writePNG, readTIFF
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking compiled code ... NOTE
Note: information on .o files for x64 is not available
File 'E:/biocbuild/bbs-3.21-bioc/R/library/EBImage/libs/x64/EBImage.dll':
  Found '_exit', possibly from '_exit' (C)
  Found 'abort', possibly from 'abort' (C), 'runtime' (Fortran)
  Found 'exit', possibly from 'exit' (C), 'stop' (Fortran)

Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor use Fortran I/O
nor system RNGs nor [v]sprintf. The detected symbols are linked into
the code but might come from libraries and not actually be called.

See 'Writing portable packages' in the 'Writing R Extensions' manual.
* checking files in 'vignettes' ... OK
* checking examples ... OK
* checking for unstated dependencies in 'tests' ... OK
* checking tests ...
  Running 'test.R'
  Comparing 'test.Rout' to 'test.Rout.save' ...231c231,234
< checking IO for 'logo' ... FAIL
---
> checking IO for 'logo' ... PASS
> Warning message:
> In readTIFF(x, all = all, ...) :
>   TIFFReadDirectory: Sum of Photometric type-related color channels and ExtraSamples doesn't match SamplesPerPixel. Defining non-color channels as ExtraSamples.
254c257
< checking 'display' ............................ PASS (68b260509c7ab340) 189.7
---
> checking 'display' ............................ PASS (4c9befc7a9f9f22e) 165.3
329c332
< checking 'display' ............................ PASS (2b8c45decab7535f) 174.7
---
> checking 'display' ............................ PASS (174250a6d96dee60) 150.3
390c393
< checking 'hist' ............................... PASS (54e35f2c85f2121f) 20513.55
---
> checking 'hist' ............................... PASS (e7a708b4f96f88dc) 20513.55
406c409
< checking 'display' ............................ PASS (2f08603669942058) 421.7
---
> checking 'display' ............................ PASS (dada341199e50c3d) 397.3
483c486
< checking 'display' ............................ PASS (fb5a878c739fdf0a) 357.7
---
> checking 'display' ............................ PASS (bb2b4586191eb980) 333.3
506c509
< checking 'computeFeatures' .................... PASS (e7fd48447c725f9a) 3988895
---
> checking 'computeFeatures' .................... PASS (c1ff2e62e7bb8eee) 3989786
560c563
< checking 'display' ............................ PASS (38b074e79a93b661) 330.7
---
> checking 'display' ............................ PASS (3d646d4f07d194ba) 306.3
639c642
< checking 'display' ............................ PASS (0f4b8075d5f24755) 309.7
---
> checking 'display' ............................ PASS (2fb2fcab54a4ea5a) 285.3
669c672
< checking 'filter2' ............................ PASS (ed65f114996727cf) 26149148
---
> checking 'filter2' ............................ PASS (637287a5df76a79d) 26149148
717c720
< checking 'display' ............................ PASS (ef6dce96392bbb6d) 263.7
---
> checking 'display' ............................ PASS (bc877f5317c575b2) 239.3
795c798
< checking 'display' ............................ PASS (4ca607589cc2787e) 280.7
---
> checking 'display' ............................ PASS (d28e3e75eed04056) 256.3
873c876
< checking 'display' ............................ PASS (4ca607589cc2787e) 280.7
---
> checking 'display' ............................ PASS (d28e3e75eed04056) 256.3
 NOTE
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 3 NOTEs
See
  'E:/biocbuild/bbs-3.21-bioc/meat/EBImage.Rcheck/00check.log'
for details.