############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data BSgenomeForge ### ############################################################################## ############################################################################## * checking for file ‘BSgenomeForge/DESCRIPTION’ ... OK * preparing ‘BSgenomeForge’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘QuickBSgenomeForge.Rmd’ using rmarkdown trying URL 'https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/009/729/545/GCA_009729545.1_ASM972954v1/GCA_009729545.1_ASM972954v1_genomic.fna.gz' Content type 'application/x-gzip' length 649859 bytes (634 KB) ================================================== downloaded 634 KB trying URL 'https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/008/369/605/GCA_008369605.1_ASM836960v1/GCA_008369605.1_ASM836960v1_genomic.fna.gz' Quitting from lines 86-90 [unnamed-chunk-4] (QuickBSgenomeForge.Rmd) Error: processing vignette 'QuickBSgenomeForge.Rmd' failed with diagnostics: cannot open URL 'https://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/008/369/605/GCA_008369605.1_ASM836960v1/GCA_008369605.1_ASM836960v1_genomic.fna.gz' --- failed re-building ‘QuickBSgenomeForge.Rmd’ --- re-building ‘AdvancedBSgenomeForge.Rnw’ using Sweave --- finished re-building ‘AdvancedBSgenomeForge.Rnw’ SUMMARY: processing the following file failed: ‘QuickBSgenomeForge.Rmd’ Error: Vignette re-building failed. Execution halted