############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data AlphaMissenseR ### ############################################################################## ############################################################################## * checking for file ‘AlphaMissenseR/DESCRIPTION’ ... OK * preparing ‘AlphaMissenseR’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘alphafold.Rmd’ using rmarkdown Quitting from lines 163-166 [am_data-hg38] (alphafold.Rmd) Error: processing vignette 'alphafold.Rmd' failed with diagnostics: attempt to write a readonly database --- failed re-building ‘alphafold.Rmd’ --- re-building ‘benchmarking.Rmd’ using rmarkdown 2025-01-23 15:46:59.352 R[17264:365298280] XType: Using static font registry. --- finished re-building ‘benchmarking.Rmd’ --- re-building ‘clinvar.Rmd’ using rmarkdown --- finished re-building ‘clinvar.Rmd’ --- re-building ‘introduction.Rmd’ using rmarkdown --- finished re-building ‘introduction.Rmd’ --- re-building ‘issues.Rmd’ using rmarkdown --- finished re-building ‘issues.Rmd’ SUMMARY: processing the following file failed: ‘alphafold.Rmd’ Error: Vignette re-building failed. Execution halted