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BioC 3.5: INSTALL report for phyloseq on tokay2

This page was generated on 2017-10-18 14:21:40 -0400 (Wed, 18 Oct 2017).

Package 979/1381HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
phyloseq 1.20.0
Paul J. McMurdie
Snapshot Date: 2017-10-17 17:00:52 -0400 (Tue, 17 Oct 2017)
URL: https://git.bioconductor.org/packages/phyloseq
Branch: RELEASE_3_5
Last Commit: 107d1d5
Last Changed Date: 2017-04-24 15:45:44 -0400 (Mon, 24 Apr 2017)
malbec2 Linux (Ubuntu 16.04.1 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
veracruz2 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: phyloseq
Version: 1.20.0
Command: rm -rf phyloseq.buildbin-libdir && mkdir phyloseq.buildbin-libdir && C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.5/bioc/src/contrib/phyloseq_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.5-bioc\R\bin\R.exe CMD INSTALL --build --library=phyloseq.buildbin-libdir --merge-multiarch phyloseq_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.5-bioc\R\bin\R.exe CMD INSTALL phyloseq_1.20.0.zip && rm phyloseq_1.20.0.tar.gz phyloseq_1.20.0.zip
StartedAt: 2017-10-17 18:27:20 -0400 (Tue, 17 Oct 2017)
EndedAt: 2017-10-17 18:29:17 -0400 (Tue, 17 Oct 2017)
EllapsedTime: 117.3 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf phyloseq.buildbin-libdir && mkdir phyloseq.buildbin-libdir  && C:\cygwin\bin\curl.exe -O http://172.29.0.4/BBS/3.5/bioc/src/contrib/phyloseq_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.5-bioc\R\bin\R.exe CMD INSTALL --build --library=phyloseq.buildbin-libdir --merge-multiarch phyloseq_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.5-bioc\R\bin\R.exe CMD INSTALL phyloseq_1.20.0.zip  && rm phyloseq_1.20.0.tar.gz phyloseq_1.20.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 1739k  100 1739k    0     0  51.1M      0 --:--:-- --:--:-- --:--:-- 53.0M

install for i386

* installing *source* package 'phyloseq' ...
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
   'phyloseq-FAQ.Rmd' using 'UTF-8' 
   'phyloseq-analysis.Rmd' 
   'phyloseq-basics.Rmd' 
   'phyloseq-mixture-models.Rmd' 
** testing if installed package can be loaded

install for x64

* installing *source* package 'phyloseq' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'phyloseq' as phyloseq_1.20.0.zip
* DONE (phyloseq)
* installing to library 'C:/Users/biocbuild/bbs-3.5-bioc/R/library'
package 'phyloseq' successfully unpacked and MD5 sums checked